PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 535aa    MW: 59495.4 Da    PI: 6.9722
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH110.000784284601855
                     HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  L++++ +      +K + a++L +A+ YIk Lq
  XP_004496220.1 428 EKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 460
                     5777888888887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.896410459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-9425474IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-7425467IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.88E-4428464No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MSGECGGNTI ATSTTPLNWW YLQTNSLSSN WNDVKHAWNN NQMNPNSSSS CEDQDISVSS  60
TSFTNASNHS TLTVESSRRV FVDQPHAPSS NDFMAQHASD NQLWSHVLSG VGTNGELHNN  120
QEIGENFLDA LSSKTMFEPA CDYLKKLDTS WEYSNPTSFN SNFEKHLNGY SEALIENNER  180
LTKLSNLVST WSIAPPDPEV SSQFDPQTNN MSNNLNSSSM NHHFSQSNPS CLFKPPFDDS  240
TSCTIVDQGV GNKNSGSILF PNICHDDDHD MKVKQEFNHH HASEVMHGHV FGKSFNPNGY  300
LDGFNNSVNS VGESGKFYQG LSNNISPCTK NFSDVISFNS RFGRPVIGIH AQRPNIKYSS  360
NLSESKKQSL HSSSHMRNSN GRGEGTTREI KKKRSEESSE ASLKKTKQDT STTNSSSKVQ  420
APKVKLGEKI TALQQIVSPF GKTDTASVLF EAIGYIKFLQ EQVQLLSNPY LKANSHKDPR  480
GISCFDRKDH KEDGKMDLRS RGLCLVPTSC TPLVYRENST GPDYWTPAYR GCLYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496220.10.0PREDICTED: transcription factor bHLH133 isoform X1
TrEMBLA0A072VPZ10.0A0A072VPZ1_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA10G35040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.19e-43bHLH family protein